open Core.Std
open Biocaml_internal_utils
open Stream.Infix
type ('a,'b,'c,'d) t = {
table : ('b,'d) Hashtbl.t ;
zero : 'd ;
proj : 'a -> 'b ;
add : 'c -> 'd -> 'd
}
let create ?(n = 251) zero proj add = {
table = Hashtbl.Poly.create ~size:n () ;
zero ; proj ; add
}
let add (t : ('a,'b,'c,'d) t) x y =
let bin = t.proj x in
let accu = Hashtbl.find t.table bin |? t.zero in
Hashtbl.replace t.table bin (t.add y accu)
let stream t = Stream.of_hashtbl t.table
let get t = Hashtbl.find t.table
type 'instance counter = ('instance, 'instance, int, int) t
module Counter = struct
type 'a t = 'a counter
let create ?n () = create ?n 0 ident ( + )
let add = add
let tick accu x = add accu x 1
let stream = stream
let of_stream e =
let c = create () in
Stream.iter ~f:(tick c) e ;
c
end
let counts f e =
stream (Counter.of_stream (e /@ f))
let product ?filter f l1 l2 = Counter.(
let c = create () in
let tick = match filter with
| Some p -> fun e1 e2 -> if p e1 e2 then tick c (f e1 e2)
| None -> fun e1 e2 -> tick c (f e1 e2)
in
List.iter ~f:(fun e1 -> List.iter ~f:(tick e1) l2) l1 ;
stream c
)
type ('a, 'b) relation = ('a,'a,'b,'b list) t
module Relation = struct
type ('a, 'b) t = ('a,'b) relation
let create ?n () =
create [] ident (fun x xs -> x :: xs)
let add = add
let stream = stream
let of_stream xs =
let r = create () in
Stream.iter
~f:(fun (x,y) -> add r x y)
xs ;
r
end
let relation xs = stream (Relation.of_stream xs)