functor (Chromosome : Chromosome) ->
sig
type range = Biocaml_range.t
type location =
Biocaml_genomeMap.Chromosome.t * Biocaml_genomeMap.Make.range
module Selection :
sig
type t
val inter :
Biocaml_genomeMap.Make.Selection.t ->
Biocaml_genomeMap.Make.Selection.t ->
Biocaml_genomeMap.Make.Selection.t
val union :
Biocaml_genomeMap.Make.Selection.t ->
Biocaml_genomeMap.Make.Selection.t ->
Biocaml_genomeMap.Make.Selection.t
val diff :
Biocaml_genomeMap.Make.Selection.t ->
Biocaml_genomeMap.Make.Selection.t ->
Biocaml_genomeMap.Make.Selection.t
val size : Biocaml_genomeMap.Make.Selection.t -> int
val intersects :
Biocaml_genomeMap.Make.Selection.t ->
Biocaml_genomeMap.Make.location -> bool
val overlap :
Biocaml_genomeMap.Make.Selection.t ->
Biocaml_genomeMap.Make.location -> int
val to_stream :
Biocaml_genomeMap.Make.Selection.t ->
Biocaml_genomeMap.Make.location Stream.t
val of_stream :
Biocaml_genomeMap.Make.location Stream.t ->
Biocaml_genomeMap.Make.Selection.t
end
module type Signal =
sig
type 'a t
val eval :
'a Biocaml_genomeMap.Make.Signal.t ->
default:'a -> Biocaml_genomeMap.Chromosome.t -> int -> 'a
val fold :
'a Biocaml_genomeMap.Make.Signal.t ->
init:'c ->
f:('c -> Biocaml_genomeMap.Make.location -> 'b -> 'c) -> 'c
val to_stream :
'a Biocaml_genomeMap.Make.Signal.t ->
(Biocaml_genomeMap.Make.location * 'a) Stream.t
val of_stream :
('a -> 'a -> 'a) ->
(Biocaml_genomeMap.Make.location * 'a) Stream.t ->
'a Biocaml_genomeMap.Make.Signal.t
end
module LSet :
sig
type t
val to_stream :
Biocaml_genomeMap.Make.LSet.t ->
Biocaml_genomeMap.Make.location Stream.t
val of_stream :
Biocaml_genomeMap.Make.location Stream.t ->
Biocaml_genomeMap.Make.LSet.t
val intersects :
Biocaml_genomeMap.Make.LSet.t ->
Biocaml_genomeMap.Make.location -> bool
val closest :
Biocaml_genomeMap.Make.LSet.t ->
Biocaml_genomeMap.Make.location ->
(Biocaml_genomeMap.Make.location * int) option
val intersecting_elems :
Biocaml_genomeMap.Make.LSet.t ->
Biocaml_genomeMap.Make.location ->
Biocaml_genomeMap.Make.location Stream.t
end
module LMap :
sig
type 'a t
val to_stream :
'a Biocaml_genomeMap.Make.LMap.t ->
(Biocaml_genomeMap.Make.location * 'a) Stream.t
val of_stream :
(Biocaml_genomeMap.Make.location * 'a) Stream.t ->
'a Biocaml_genomeMap.Make.LMap.t
val intersects :
'a Biocaml_genomeMap.Make.LMap.t ->
Biocaml_genomeMap.Make.location -> bool
val closest :
'a Biocaml_genomeMap.Make.LMap.t ->
Biocaml_genomeMap.Make.location ->
(Biocaml_genomeMap.Make.location * 'a * int) option
val intersecting_elems :
'a Biocaml_genomeMap.Make.LMap.t ->
Biocaml_genomeMap.Make.location ->
(Biocaml_genomeMap.Make.location * 'a) Stream.t
end
end