sig
type comment = [ `comment of string ]
type variable_step =
[ `variable_step_state_change of string * int option
| `variable_step_value of int * float ]
type fixed_step =
[ `fixed_step_state_change of string * int * int * int option
| `fixed_step_value of float ]
type bed_graph_value = string * int * int * float
type t =
[ `bed_graph_value of Biocaml_wig.bed_graph_value
| `comment of string
| `fixed_step_state_change of string * int * int * int option
| `fixed_step_value of float
| `variable_step_state_change of string * int option
| `variable_step_value of int * float ]
type parse_error =
[ `cannot_parse_key_values of Biocaml_pos.t * string
| `empty_line of Biocaml_pos.t
| `incomplete_input of Biocaml_pos.t * string list * string option
| `missing_chrom_value of Biocaml_pos.t * string
| `missing_start_value of Biocaml_pos.t * string
| `missing_step_value of Biocaml_pos.t * string
| `unrecognizable_line of Biocaml_pos.t * string list
| `wrong_bed_graph_value of Biocaml_pos.t * string
| `wrong_fixed_step_value of Biocaml_pos.t * string
| `wrong_span_value of Biocaml_pos.t * string
| `wrong_start_value of Biocaml_pos.t * string
| `wrong_step_value of Biocaml_pos.t * string
| `wrong_variable_step_value of Biocaml_pos.t * string ]
val parse_error_to_string : Biocaml_wig.parse_error -> string
type tag = [ `pedantic | `sharp_comments ]
val default_tags : Biocaml_wig.tag list
module Transform :
sig
val string_to_t :
?filename:string ->
?tags:Biocaml_wig.tag list ->
unit ->
(string, (Biocaml_wig.t, Biocaml_wig.parse_error) Core.Result.t)
Biocaml_transform.t
val t_to_string :
?tags:Biocaml_wig.tag list ->
unit -> (Biocaml_wig.t, string) Biocaml_transform.t
val t_to_bed_graph :
unit ->
(Biocaml_wig.t,
(Biocaml_wig.bed_graph_value,
[ `not_in_fixed_step_state | `not_in_variable_step_state ])
Core.Result.t)
Biocaml_transform.t
end
val comment_of_sexp : Sexplib.Sexp.t -> Biocaml_wig.comment
val comment_of_sexp__ : Sexplib.Sexp.t -> Biocaml_wig.comment
val sexp_of_comment : Biocaml_wig.comment -> Sexplib.Sexp.t
val variable_step_of_sexp : Sexplib.Sexp.t -> Biocaml_wig.variable_step
val variable_step_of_sexp__ : Sexplib.Sexp.t -> Biocaml_wig.variable_step
val sexp_of_variable_step : Biocaml_wig.variable_step -> Sexplib.Sexp.t
val fixed_step_of_sexp : Sexplib.Sexp.t -> Biocaml_wig.fixed_step
val fixed_step_of_sexp__ : Sexplib.Sexp.t -> Biocaml_wig.fixed_step
val sexp_of_fixed_step : Biocaml_wig.fixed_step -> Sexplib.Sexp.t
val bed_graph_value_of_sexp : Sexplib.Sexp.t -> Biocaml_wig.bed_graph_value
val sexp_of_bed_graph_value : Biocaml_wig.bed_graph_value -> Sexplib.Sexp.t
val t_of_sexp : Sexplib.Sexp.t -> Biocaml_wig.t
val t_of_sexp__ : Sexplib.Sexp.t -> Biocaml_wig.t
val sexp_of_t : Biocaml_wig.t -> Sexplib.Sexp.t
val parse_error_of_sexp : Sexplib.Sexp.t -> Biocaml_wig.parse_error
val parse_error_of_sexp__ : Sexplib.Sexp.t -> Biocaml_wig.parse_error
val sexp_of_parse_error : Biocaml_wig.parse_error -> Sexplib.Sexp.t
val tag_of_sexp : Sexplib.Sexp.t -> Biocaml_wig.tag
val tag_of_sexp__ : Sexplib.Sexp.t -> Biocaml_wig.tag
val sexp_of_tag : Biocaml_wig.tag -> Sexplib.Sexp.t
end