type
t = [ `file_to_bed of
(string,
(Biocaml_bed.item, input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_char_fasta of
(string,
(Biocaml_fasta.char_seq Biocaml_fasta.raw_item,
input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_fastq of
(string,
(Biocaml_fastq.item, input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_gff of
(string,
(Biocaml_gff.item, input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_int_fasta of
(string,
(Biocaml_fasta.int_seq Biocaml_fasta.raw_item,
input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_sam_item of
(string,
(Biocaml_sam.item, input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_table of
(string,
(Biocaml_table.Row.t, input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_wig of
(string,
(Biocaml_wig.item, input_error)
Core.Result.t)
Biocaml_transform.t
| `two_files_to_fastq of
(string * string,
(Biocaml_fastq.item, input_error)
Core.Result.t)
Biocaml_transform.t ]
The general input transformation.
val name : t -> string
Get a string describing and input transform (for debug/display
purposes).
val from_tags : ?zlib_buffer_size:int ->
tags ->
(t, [> `not_implemented of string ])
Core.Result.t
Create an Input_transform.t
from tags
describing the format.