sig
type input_error =
[ `bam of Biocaml_bam.Error.raw_bam
| `bam_to_item of Biocaml_bam.Error.raw_to_item
| `bed of Biocaml_bed.Error.parsing
| `fasta of Biocaml_fasta.Error.t
| `fasta_lengths_mismatch
| `fastq of Biocaml_fastq.Error.t
| `gff of Biocaml_gff.Error.parsing
| `sam of Biocaml_sam.Error.string_to_raw
| `sam_to_item of Biocaml_sam.Error.raw_to_item
| `table_row of Biocaml_table.Row.Error.t
| `unzip of Biocaml_zip.Error.unzip
| `wig of Biocaml_wig.Error.parsing ]
type tags = Biocaml_tags.t
type t =
[ `file_to_bed of
(string,
(Biocaml_bed.item, Biocaml_tags.Input_transform.input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_char_fasta of
(string,
(Biocaml_fasta.char_seq Biocaml_fasta.raw_item,
Biocaml_tags.Input_transform.input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_fastq of
(string,
(Biocaml_fastq.item, Biocaml_tags.Input_transform.input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_gff of
(string,
(Biocaml_gff.item, Biocaml_tags.Input_transform.input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_int_fasta of
(string,
(Biocaml_fasta.int_seq Biocaml_fasta.raw_item,
Biocaml_tags.Input_transform.input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_sam_item of
(string,
(Biocaml_sam.item, Biocaml_tags.Input_transform.input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_table of
(string,
(Biocaml_table.Row.t, Biocaml_tags.Input_transform.input_error)
Core.Result.t)
Biocaml_transform.t
| `file_to_wig of
(string,
(Biocaml_wig.item, Biocaml_tags.Input_transform.input_error)
Core.Result.t)
Biocaml_transform.t
| `two_files_to_fastq of
(string * string,
(Biocaml_fastq.item, Biocaml_tags.Input_transform.input_error)
Core.Result.t)
Biocaml_transform.t ]
val name : Biocaml_tags.Input_transform.t -> string
val from_tags :
?zlib_buffer_size:int ->
Biocaml_tags.Input_transform.tags ->
(Biocaml_tags.Input_transform.t, [> `not_implemented of string ])
Core.Result.t
val sexp_of_input_error :
Biocaml_tags.Input_transform.input_error -> Sexplib.Sexp.t
end