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Module Biocaml_sam_deprecated.Flags (.ml)

module Flags:
sig

Manipulate the alignment flags.
type t = private int
Flags are represented as “bit map”.
val of_int : int -> t
val has_multiple_segments : t -> bool
val each_segment_properly_aligned : t -> bool
val segment_unmapped : t -> bool
val next_segment_unmapped : t -> bool
val seq_is_reverse_complemented : t -> bool
val next_seq_is_reverse_complemented : t -> bool
val first_segment : t -> bool
val last_segment : t -> bool
val secondary_alignment : t -> bool
val not_passing_quality_controls : t -> bool
val pcr_or_optical_duplicate : t -> bool
include Sexpable.S
end