module Error: sig .. end
Errors. All errors generated by any function in the
Fasta module
are defined here. Type
t is the union of all errors, and subsets
of this are defined as needed to specify precise return types for
various functions.
`empty_line pos - an empty line was found in a position pos
where it is not allowed.
`incomplete_input (lines,s) - the input ended
prematurely. Trailing contents, which cannot be used to fully
construct an item, are provided: lines is the complete lines
parsed and s is any final string not ending in a newline.
`malformed_partial_sequence s - indicates that s could not
be parsed into a valid (partial) sequence value.
`unnamed_char_seq x - a char_seq value x was found without
a preceding header section.
`unnamed_int_seq x - an int_seq value x was found without
a preceding header section.
type [ `empty_line of Biocaml_pos.t
| `incomplete_input of Biocaml_pos.t * string list * string option
| `malformed_partial_sequence of string ]
Errors raised when converting a string to a raw_item.
type [ `empty_line of Biocaml_pos.t
| `incomplete_input of Biocaml_pos.t * string list * string option
| `malformed_partial_sequence of string
| `unnamed_char_seq of Biocaml_fasta.char_seq
| `unnamed_int_seq of Biocaml_fasta.int_seq ]
Union of all errors.
S-expressions
val sexp_of_string_to_raw_item : string_to_raw_item -> Sexplib.Sexp.t
val string_to_raw_item_of_sexp : Sexplib.Sexp.t -> string_to_raw_item
val string_to_raw_item_of_sexp__ : Sexplib.Sexp.t -> string_to_raw_item
val sexp_of_t : t -> Sexplib.Sexp.t
val t_of_sexp : Sexplib.Sexp.t -> t
val t_of_sexp__ : Sexplib.Sexp.t -> t